Co-expression analysis

Gene ID	1606551_at
Gene name	hypothetical protein LOC100255969
Homology with Arabidopsis	Similar to At4g25660: unknown protein (HF=6e-30)
Module size	6 genes
NF	0.23
%ile	32.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	94.6	0.97	1606551_at	CF211871	hypothetical protein LOC100255969	-	6e-30	At4g25660	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1622703_at	CF513128	-	-	5e-3	At4g25660	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.98	1610674_at	CF511328	hypothetical protein LOC100242639	-	2e-158	At3g23340	ckl10 (Casein Kinase I-like 10)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.98	1619392_at	CF513478	hypothetical protein LOC100259847	-	4e+0	At3g24060	self-incompatibility protein-related	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.98	1614241_at	CF209157	hypothetical protein LOC100255909	-	7e-6	At1g14685	BPC2 (BASIC PENTACYSTEINE 2)	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.97	1611961_at	CF516769	hypothetical protein LOC100242919	-	2e-9	At5g51620	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.5	99.2	GSM436357	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.5	91.9	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.5	91.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.3	90.7	GSM287885	Green soft berry A22 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM287879	Green hard berry C19 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM436364	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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