Co-expression analysis

Gene ID 1606517_at
Gene name hypothetical protein LOC100247111
Homology with ArabidopsisSimilar to At1g20030: pathogenesis-related thaumatin family protein (HF=5e-5)
Module size 12 genes
NF 0.49
%ile 73.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9299.00.931606517_atCB347191hypothetical protein LOC100247111-5e-5At1g20030pathogenesis-related thaumatin family proteinO.I.H.G.S.X.
0.6787.90.941615128_atCB339351hypothetical protein LOC100253412-1e+0At3g45093-O.I.H.G.S.X.
0.6484.70.951611645_atCB349661hypothetical protein LOC100252175-4e-1At1g11360universal stress protein (USP) family proteinO.I.H.G.S.X.
0.4868.80.961619887_atCB976758hypothetical protein LOC100255748-4e-10At1g19740ATP-dependent protease La (LON) domain-containing proteinO.I.H.G.S.X.
0.4767.70.951609903_atCF516465hypothetical protein LOC100256148-4e+0At5g02200FHL (FAR-RED-ELONGATED HYPOCOTYL1-LIKE)O.I.H.G.S.X.
0.4767.70.971607155_atCD718615hypothetical protein LOC100266884-2e-6At1g50020unknown proteinO.I.H.G.S.X.
0.4464.10.961609024_s_atCA818633hypothetical protein LOC100242371-6e-25At5g57040lactoylglutathione lyase family protein / glyoxalase I family proteinO.I.H.G.S.X.
0.4057.70.951615541_s_atBM436534hypothetical protein LOC100267831-5e-7At2g46690auxin-responsive family proteinO.I.H.G.S.X.
0.3650.70.961620884_atCF372800hypothetical protein LOC100255959-1e-63At1g68830STN7 (Stt7 homolog STN7)O.I.H.G.S.X.
0.3345.70.971607017_atCA816965--8e-2At3g53470unknown proteinO.I.H.G.S.X.
0.2937.70.971622100_atBM436534hypothetical protein LOC100267831-5e-7At2g46690auxin-responsive family proteinO.I.H.G.S.X.
0.2327.50.961620267_atCB972336hypothetical protein LOC100264696-7e-9At5g20140SOUL heme-binding family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.595.7GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.194.6GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.692.5GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.591.9GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.390.7GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.390.7GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.289.9GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.289.9GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.088.2GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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