Co-expression analysis

Gene ID	1606471_at
Gene name	hypothetical protein LOC100244589
Homology with Arabidopsis	Similar to At5g07030: aspartic-type endopeptidase (HF=3e-6)
Module size	7 genes
NF	0.70
%ile	94.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.96	1606471_at	CF372161	hypothetical protein LOC100244589	-	3e-6	At5g07030	aspartic-type endopeptidase	O.I.	H.G.	S.X.	Please select
0.83	94.6	0.97	1610683_at	CF214265	hypothetical protein LOC100264093	-	2e-6	At5g67260	CYCD3	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.96	1608191_at	CD798831	hypothetical protein LOC100245911	-	4e-20	At2g39700	ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.97	1611378_at	CF606069	hypothetical protein LOC100244478	-	2e-8	At1g60630	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.97	1617440_at	CF373136	hypothetical protein LOC100247017	-	8e-2	At5g61470	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.97	1620766_at	CF609305	hypothetical protein LOC100249220	-	9e-18	At1g23000	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.96	1618871_at	CF510551	hypothetical protein LOC100265907	-	3e-7	At4g38660	thaumatin, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.2	99.4	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
5.3	98.2	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.8	93.4	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.0	88.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.0	88.2	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
1.9	87.2	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.9	87.2	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
1.8	86.0	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
1.8	86.0	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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